论文致谢
论文致谢模板¶
中文： 本论文的计算结果得到了华中农业大学作物遗传改良全国重点实验室生物信息计算平台的支持和帮助。
English: The computations in this paper were run on the bioinformatics computing platform of the National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University.
新闻稿致谢： 该研究数据分析工作得到华中农业大学作物遗传改良全国重点实验室生物信息计算平台的支持和帮助。
致谢文章列表¶
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| 年份 | 文章 | 期刊 | 期刊分级 |
|---|---|---|---|
| 2021 | Using high-throughput multiple optical phenotyping to decipher the genetic architecture of maize drought tolerance | Genome Biology | A |
| 2021 | The genetic mechanism of heterosis utilization in maize improvement | Genome Biology | A |
| 2021 | Cotton pan-genome retrieves the lost sequences and genes during domestication and selection | Genome Biology | A |
| 2021 | ASMdb: a comprehensive database for allele-specific DNA methylation in diverse organisms | Nucleic Acids Research | B |
| 2021 | An inferred functional impact map of genetic variants in rice | Molecular Plant | B |
| 2021 | Comparative Genome Analyses Highlight TransposonMediated Genome Expansion and the Evolutionary Architecture of 3D Genomic Folding in Cotton | Molecular Biology and Evolution | B |
| 2021 | Two gap-free reference genomes and a global view of the centromere architecture in rice | Molecular Plant | B |
| 2021 | Calling large indels in 1047 Arabidopsis with IndelEnsembler | Nucleic Acids Research | B |
| 2022 | A multi-omics integrative network map of maize | Nature Genetics | A |
| 2022 | Genome sequencing reveals evidence of adaptive variation in the genus Zea | Nature Genetics | A |
| 2022 | Genomic innovation and regulatory rewiring during evolution of the cotton genus Gossypium | Nature Genetics | A |
| 2022 | Origin and chromatin remodeling of young X/Y sex chromosomes in catfish with sexual plasticity | National Science Review | A |
| 2022 | DNA demethylation affects imprinted gene expression in maize endosperm | Genome Biology | A |
| 2022 | DNA methylation underpins the epigenomic landscape regulating genome transcription in Arabidopsis | Genome Biology | A |
| 2022 | Dynamic 3D genome architecture of cotton fiber reveals subgenome-coordinated chromatin topology for 4-staged single-cell differentiation | Genome Biology | A |
| 2022 | Multi-omics analysis dissects the genetic architecture of seed coat content in Brassica napus | Genome Biology | A |
| 2022 | Comprehensive transcriptional variability analysis reveals gene networks regulating seed oil content of Brassica napus | Genome Biology | A |
| 2022 | A pan-Zea genome map for enhancing maize improvement | Genome Biology | A |
| 2022 | Hierarchical Accumulation of Histone Variant H2A.Z Regulates Transcriptional States and Histone Modifications in Early Mammalian Embryos | Advanced Science | A |
| 2022 | Heritability of tomato rhizobacteria resistant to Ralstonia | Microbiome | B |
| 2022 | Pervasive misannotation of microexons that are evolutionarily conserved and crucial for gene function in plants | Nature Communications | B |
| 2022 | A NAC-EXPANSIN module enhances maize kernel size by controlling nucellus elimination | Nature Communications | B |
| 2022 | ChromLoops: a comprehensive database for specific protein-mediated chromatin loops in diverse organisms | Nucleic Acids Research | B |
| 2022 | CottonMD: a multi-omics database for cotton biological study | Nucleic Acids Research | B |
| 2022 | Coordination of zygotic genome activation entry and exit by H3K4me3 and H3K27me3 in porcine early embryos | Genome Research | B |
| 2022 | DeepBSA: A deep-learning algorithm improves bulked segregant analysis for dissecting complex traits | Molecular Plant | B |
| 2022 | Starch phosphorylase 2 is essential for cellular carbohydrate partitioning in maize | Journal of Integrative Plant Biology | |
| 2022 | Constructing the maize inflorescence regulatory network by using efficient tsCUT&Tag assay | The Crop Journal | |
| 2022 | Precision Probiotics in Agroecosystems: Multiple Strategies of Native Soil Microbiotas for Conquering the Competitor Ralstonia solanacearum | Msystems | |
| 2022 | Molecular evidence for adaptive evolution of drought tolerance in wild | New Phytologist | |
| 2022 | eQTLs play critical roles in regulating gene expression and identifying key regulators in rice | Plant Biotechnology Journal | |
| 2022 | Genome‑wide association study identifies new loci for 1000‑seed weight in Brassica napus | Euphytica | |
| 2022 | Genome‑wide association study identifies candidate genes and favorable haplotypes for seed yield in Brassica napus | Molecular Breeding | |
| 2022 | Stomata at the crossroad of molecular interaction between biotic and abiotic stress responses in plants | Frontiers in plant science | |
| 2022 | Identification of a candidate gene underlying qHKW3, a QTL for hundred-kernel weight in maize | Theoretical and Applied Genetics | |
| 2022 | Sexually Dimorphic Gene Expression in X and Y Sperms Instructs Sexual Dimorphism of Embryonic Genome Activation in Yellow Catfish | Biology (Basel) | |
| 2023.06 | Genome editing of a rice CDP-DAG synthase confers multipathogen resistance | Nature | A+ |
| 2023.12 | Two teosintes made modern maize | Science | A+ |
| 2023.03 | A translatome-transcriptome multi-omics gene regulatory network reveals the complicated functional landscape of maize | Genome Biology | A |
| 2023.04 | Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis | Genome Biology | A |
| 2023.08 | 3D organization of regulatory elements for transcriptional regulation in Arabidopsis | Genome Biology | A |
| 2023.08 | Single-cell resolution analysis reveals the preparation for reprogramming the fate of the plant stem cell niche in lateral meristems | Genome Biology | A |
| 2023.08 | A DNA adenine demethylase impairs PRC2-mediated repression of genes marked by a specific chromatin signature | Genome Biology | A |
| 2023.08 | Suppressing a phosphohydrolase of cytokinin nucleotide enhances grain yield in rice | Nature Genetics | A |
| 2023.10 | Regulatory controls of duplicated gene expression during fiber development in allotetraploid cotton | Nature Genetics | A |
| 2023.08 | Spontaneous movement of a retrotransposon generated genic dominant male sterility providing a useful tool for rice breeding | National Science Review | A |
| 2023.11 | Single-Cell Transcriptome Atlas and Regulatory Dynamics in Developing Cotton Anthers | Advanced Science | A |
| 2023.11 | Age-dependent seasonal growth cessation in Populus | PNAS | A |
| 2023.05 | Haplotype mapping of H3K27me3-associated chromatin interactions defines topological regulation of gene silencing in rice | Cell Reports | B |
| 2023.09 | DELLA-mediated gene repression is maintained by chromatin modification in rice | EMBO Journal | B |
| 2023.08 | Centromere plasticity with evolutionary conservation and divergence uncovered by wheat 10+ genomes | Molecular Biology and Evolution | B |
| 2023.02 | A minimal genome design to maximally guarantee fertile inter-subspecific hybrid rice | Molecular Plant | B |
| 2023.03 | Rice Gene Index: A comprehensive pan-genome database for comparative and functional genomics of Asian rice | Molecular Plant | B |
| 2023.03 | BnIR: A multi-omics database with various tools for Brassica napus research and breeding | Molecular Plant | B |
| 2023.08 | MaizeNetome: A multi-omics network database for functional genomics in maize | Molecular Plant | B |
| 2023.10 | Control of rice ratooning ability by a nucleoredoxin that inhibits histidine kinase dimerization to attenuate cytokinin signaling in axillary bud growth | Molecular Plant | B |
| 2023.08 | Integrated 3D Genome, Epigenome, and Transcriptome Analyses Reveal Transcriptional Coordination of Circadian Rhythm in Rice | Nucleic Acids Research | B |
| 2023.10 | SoyMD: a platform combining multi-omics data with various tools for soybean research and breeding | Nucleic Acids Research | B |
| 2023.10 | PMhub 1.0: a comprehensive plant metabolome database | Nucleic Acids Research | B |
| 2023.10 | MethMarkerDB: a comprehensive cancer DNA methylation biomarker database | Nucleic Acids Research | B |
| 2023.03 | Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of Asian rice | Nature Communications | B |
| 2023.08 | QTG-Miner aids rapid dissection of the genetic base of tassel branch number in maize | Nature Communications | B |
| 2023.10 | Paternal DNA methylation is remodeled to maternal levels in rice zygote | Nature Communications | B |
| 2023.11 | Transcriptome-wide association analyses reveal the impact of regulatory variants on rice panicle architecture and causal gene regulatory networks | Nature Communications | B |
| 2023.06 | Serine protease NAL1 exerts pleiotropic functions through degradation of TOPLESS-related corepressor in rice | Nature Plants | B |
| 2023.11 | Chemical-tag-based semi-annotated metabolomics facilitates gene identification and specialized metabolic pathway elucidation in wheat | Plant Cell | B |
| 2023.04 | Identification of sex-linked codominant markers and development of a rapid LAMP-based genetic sex identification method in channel catfish (Ictalurus punctatus) | Aquaculture | |
| 2023.12 | Comparative Mitogenome Analyses Uncover Mitogenome Features and Phylogenetic Implications of the Reef Fish Family | Biology (Basel) | |
| 2023.09 | The chromosome-scale reference genome of mirid bugs (Adelphocoris suturalis) genome provides insights into omnivory, insecticide resistance, and survival adaptation | BMC Biology | |
| 2023.03 | RNA binding proteins are potential novel biomarkers of egg quality in yellow catfish | BMC Genomics | |
| 2023.03 | The genomic characteristics affect phenotypic diversity from the perspective of genetic improvement of economic traits | iScience | |
| 2023.03 | ZmHOX32 is related to photosynthesis and likely functions in plant architecture of maize | Frontiers in Plant Science | |
| 2023.02 | A heavy metal transporter gene ZmHMA3a promises safe agricultural production on cadmium-polluted arable land | Journal of Genetics and Genomics | |
| 2023.05 | Revealing the process of storage protein rebalancing in high quality protein maize by proteomic and transcriptomic | Journal of Integrative Agriculture | |
| 2023.02 | ArecaceaeMDB: a comprehensive multi-omics database for Arecaceae breeding and functional genomics studies | Plant Biotechnology Journal | |
| 2023.04 | Domains Rearranged Methylase 2 maintains DNA methylation at large DNA hypomethylated shores and long-range chromatin interactions in rice | Plant Biotechnology Journal | |
| 2023.04 | The amino acid residue E96 of Ghd8 is crucial for the formation of the flowering repression complex Ghd7‐Ghd8‐OsHAP5C in rice | Journal of Integrative Plant Biology | |
| 2023.06 | Deciphering genetic basis of developmental and agronomic traits by integrating high-throughput optical phenotyping and genome-wide association studies in wheat | Plant Biotechnology Journal | |
| 2023.05 | Complex genetic architecture underlying the plasticity of maize agronomic traits | Plant Communications | |
| 2023.03 | Ribosome profiling reveals the translational landscape and allele-specific translational efficiency in rice | Plant Communications | |
| 2023.07 | Histone H3 lysine 27 trimethylation suppresses jasmonate biosynthesis and signaling to affect male fertility under high temperature in cotton | Plant Communications | |
| 2023.09 | High-quality reference genome assemblies for two Australimusa bananas provide insights into genetic diversity of the Musaceae family and regulatory mechanisms of superior fiber properties | Plant Communications | |
| 2023.09 | Identification of propranolol and derivatives that are chemical inhibitors of phosphatidate phosphatase as potential broad-spectrum fungicides | Plant Communications | |
| 2023.09 | High-quality Gossypium hirsutum and Gossypium barbadense genome assemblies reveal the centromeric landscape and evolution | Plant Communications | |
| 2023.10 | PlantCFG: A comprehensive database with web tools for analyzing candidate flowering genes in multiple plants | Plant Communications | |
| 2023.10 | The CCT transcriptional activator Ghd2 constantly delays the heading date by upregulating CO3 in rice | Journal of Genetics and Genomics | |
| 2023.11 | Two haplotype-resolved genome assemblies for AAB allotriploid bananas provide insights into banana subgenome asymmetric evolution and Fusarium wilt control | Plant Communications | |
| 2023.11 | A complete reference genome for the soybean cv. Jack | Plant Communications | |
| 2023.10 | Hi-Tag: A Simple and Efficient Method for Identifying Protein-Mediated Long-Range Chromatin Interactions with Low Cell Numbers | Science China Life Sciences | |
| 2023.04 | iBP-seq: An efficient and low-cost multiplex targeted genotyping and epigenotyping system | The Crop Journal | |
| 2023.11 | High-quality assembly and methylome of a Tibetan wild tree peony genome (Paeonia ludlowii) reveal the evolution of giant genome architecture | Horticulture Research | |
| 2023.12 | Characterizing of structural variants based on graph-genotyping provides insights into pig domestication and local adaption | Journal of Genetics and Genomics | |
| 2023.12 | Genomic evidence for climate-linked diversity loss and increased vulnerability of wild barley spanning 28 years of climate warming | Science of The Total Environment | |
| 2024.01 | Synergistic interplay of redox homeostasis and polysaccharide synthesis promotes cotton fiber elongation | Plant Journal | |
| 2024.01 | Dynamic metabolic-QTL analyses provide novel biochemical insights into the kernel development and nutritional quality improvement in common wheat | Plant Communications | |
| 2024.01 | KLF4 facilitates chromatin accessibility remodeling in porcine early embryos | SCIENCE CHINA Life Sciences | |
| 2024.02 | Lysine acetylation of histone acetyltransferase adaptor protein ADA2 is a mechanism of metabolic control of chromatin modification in plants | Nature Plants | B |
| 2024.02 | Precise fine-turning of GhTFL1 by base editing tools defines ideal cotton plant architecture | Genome Biology | A |
| 2024.02 | Beyond pathways: accelerated flavonoids candidate identification and novel exploration of enzymatic properties using combined mapping populations of wheat | Plant Biotechnology Journal | |
| 2024.03 | Three near-complete genome assemblies reveal substantial centromere dynamics from diploid to tetraploid in Brachypodium genus | Genome Biology | A |
| 2024.03 | Constructing the metabolic network of wheat kernels based on structure-guided chemical modification and multi-omics data | Journal of Genetics and Genomics | |
| 2024.03 | Dissecting the molecular basis of spike traits by integrating gene regulatory network and genetic variation in wheat | Plant Communications | |
| 2024.03 | A double-stranded RNA binding protein enhances drought resistance via protein phase separation in rice | Nature Communications | B |
| 2024.04 | DNA methylation remodeling and the functional implication during male gametogenesis in rice | Genome Biology | A |
| 2024.04 | A comprehensive benchmark of graph-based genetic variant genotyping algorithms on plant genomes for creating an accurate ensemble pipeline | Genome Biology | A |
| 2024.05 | The Genetic Basis and Process of Inbreeding Depression in an Elite Hybrid Rice | Science China Life Sciences | |
| 2024.05 | A spatial transcriptome map of the developing maize ear | Nature Plants | B |
| 2024.06 | Progressive meristem and single-cell transcriptomes reveal the regulatory mechanisms underlying maize inflorescence development and sex differentiation | Molecular Plant | B |
| 2024.06 | Powerful QTL mapping and favorable allele mining in an all-in-one population: a case study of heading date | National Science Review | A |
| 2024.06 | LEUTX regulates porcine embryonic genome activation in somatic cell nuclear transfer embryos | Cell Reports | B |
| 2024.07 | Dissecting the Superior Drivers for the Simultaneous Improvement of Fiber Quality and Yield under Drought Stress Via Genome-Wide Artificial Introgressions of Gossypium barbadense into Gossypium hirsutum | Advanced Science | A |
| 2024.07 | Stress-induced nuclear translocation of ONAC023 improves drought and heat tolerance through multiple processes in rice | Nature Communications | B |
| 2024.08 | The OsSRO1c-OsDREB2B complex undergoes protein phase transition to enhance cold tolerance in rice | Molecular Plant | B |
| 2024.08 | aChIP is an efficient and sensitive ChIP-seq technique for economically important plant organs | Nature Plants | B |
| 2024.08 | Genetic regulatory perturbation of gene expression impacted by genomic introgression in fiber development of allotetraploid cotton | Advanced Science | A |
| 2024.09 | A dynamic regulome of shoot-apical-meristem-related homeobox transcription factors modulates plant architecture in maize | Genome Biology | A |
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