subphaser

# 下载测试数据
$ wget https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/202/805/GCA_019202805.1_ASM1920280v1/GCA_019202805.1_ASM1920280v1_genomic.fna.gz -O Arabdopsis_suecica_genomic.fasta.gz -c

$ module load Singularity/3.7.3
$ singularity exec $IMAGE/subphaser/1.2.6.sif /bin/bash -c 'eval "$(micromamba shell hook --shell=bash)";micromamba activate /software/micromamba/envs/SubPhaser/;subphaser -i Arabidopsis_suecica_genome.fasta.gz -c Arabidopsis_suecica_sg.config -pre Arabidopsis_suecica_ 2>&1 | tee Arabidopsis_suecica.log'